STRINGSTRING
Psed_2890 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2890" - Histidine kinase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2890Histidine kinase (393 aa)    
Predicted Functional Partners:
Psed_2889
Winged helix family two component transcriptional regulator (221 aa)
     
  0.979
Psed_6411
Winged helix family two component transcriptional regulator (243 aa)
     
  0.880
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) (689 aa)
              0.842
Psed_0785
Winged helix family two component transcriptional regulator (233 aa)
          0.770
Psed_4823
Winged helix family two component transcriptional regulator (241 aa)
          0.765
Psed_0747
Winged helix family two component transcriptional regulator (274 aa)
          0.765
Psed_2887
Diguanylate cyclase (455 aa)
 
          0.762
Psed_6020
Winged helix family two component transcriptional regulator (259 aa)
          0.751
Psed_5028
Winged helix family two component transcriptional regulator (247 aa)
          0.749
Psed_0994
Winged helix family two component transcriptional regulator (228 aa)
          0.749
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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