STRINGSTRING
Psed_2923 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2923" - Amidohydrolase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2923Amidohydrolase (292 aa)    
Predicted Functional Partners:
Psed_2924
3-oxoacyl-ACP reductase (296 aa)
 
        0.970
Psed_2926
3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase (279 aa)
 
          0.873
Psed_2922
o-succinylbenzoate--CoA ligase (528 aa)
              0.863
Psed_2925
butyryl-CoA dehydrogenase (390 aa)
   
        0.855
Psed_2927
ABC transporter substrate-binding protein (540 aa)
              0.705
Psed_5917
long-chain-fatty-acid--CoA ligase (633 aa)
 
   
  0.676
Psed_2921
Hypothetical protein (447 aa)
              0.642
Psed_2585
Amidohydrolase (259 aa)
   
          0.637
Psed_1564
4-hydroxybenzoate 3-monooxygenase (393 aa)
 
   
  0.591
Psed_2112
Cupin (131 aa)
   
          0.516
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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