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Psed_2926 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2926" - 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_29263-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase (279 aa)    
Predicted Functional Partners:
Psed_0649
3-hydroxybutyryl-CoA epimerase (720 aa)
   
  0.980
Psed_2925
butyryl-CoA dehydrogenase (390 aa)
   
 
  0.974
Psed_2924
3-oxoacyl-ACP reductase (296 aa)
 
  0.959
Psed_4005
Carbamoyl-phosphate synthase L chain ATP-binding protein (1086 aa)
 
 
  0.939
Psed_2134
3-ketoacyl-ACP synthase I; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (414 aa)
   
  0.924
Psed_0508
3-ketoacyl-ACP synthase II (406 aa)
   
  0.924
Psed_0500
3-oxoacyl-ACP reductase (304 aa)
 
  0.907
Psed_2494
Thiolase (375 aa)
 
 
  0.890
Psed_2137
ACP S-malonyltransferase (295 aa)
   
  0.886
Psed_2234
Thiolase (380 aa)
 
 
  0.886
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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