STRINGSTRING
Psed_2929 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2929" - Protein tyrosine phosphatase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2929Protein tyrosine phosphatase (166 aa)    
Predicted Functional Partners:
Psed_2928
fructosamine/Ketosamine-3-kinase (283 aa)
        0.992
Psed_1041
ATPase-like protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP (384 aa)
   
 
  0.810
Psed_2743
Haloacid dehalogenase (223 aa)
 
        0.795
fumC
Class II fumarate hydratase (466 aa)
   
 
  0.671
cysS
cysteinyl-tRNA synthetase (482 aa)
   
   
  0.648
Psed_0114
Serine/threonine protein kinase with PASTA sensor(s) (643 aa)
 
 
  0.643
Psed_6679
Thioredoxin (109 aa)
   
 
  0.643
Psed_6510
Alkyl hydroperoxide reductase (217 aa)
   
 
  0.643
Psed_5610
Alkyl hydroperoxide reductase (197 aa)
   
 
  0.643
Psed_5320
Thioredoxin (116 aa)
   
 
  0.643
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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