STRINGSTRING
Psed_2931 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2931" - Transposase IS111A/IS1328/IS1533 in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2931Transposase IS111A/IS1328/IS1533 (416 aa)    
Predicted Functional Partners:
Psed_0498
Transposase IS116/IS110/IS902 family protein (354 aa)
 
          0.750
Psed_1201
Transposase IS116/IS110/IS902 family protein (354 aa)
 
          0.749
Psed_1560
Transposase IS116/IS110/IS902 family protein (354 aa)
 
          0.749
Psed_1201
Transposase IS116/IS110/IS902 family protein (354 aa)
 
          0.749
Psed_1804
Transposase IS116/IS110/IS902 family protein (347 aa)
 
          0.706
Psed_1804
Transposase IS116/IS110/IS902 family protein (347 aa)
 
          0.706
Psed_1253
Thymidylate kinase (569 aa)
   
          0.505
Psed_2934
Phosphoglycerate mutase (228 aa)
              0.451
Psed_2933
Hypothetical protein (246 aa)
              0.450
Psed_2932
NGG1p interacting factor 3 protein, NIF3 (383 aa)
              0.450
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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