STRINGSTRING
Psed_2933 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2933" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2933Hypothetical protein (246 aa)    
Predicted Functional Partners:
Psed_2932
NGG1p interacting factor 3 protein, NIF3 (383 aa)
   
   
  0.941
Psed_2934
Phosphoglycerate mutase (228 aa)
   
        0.912
Psed_2758
Hypothetical protein (182 aa)
   
          0.701
Psed_3290
Transcriptional regulator protein (346 aa)
   
        0.679
Psed_1783
vitamin-B12 independent methionine synthase (421 aa)
   
        0.676
prcA
Proteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation (267 aa)
   
          0.647
Psed_0608
Hypothetical protein (484 aa)
   
          0.624
Psed_5259
Hypothetical protein (191 aa)
   
          0.623
Psed_2132
Hypothetical protein (162 aa)
   
          0.611
Psed_3415
Electron transport protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters (115 aa)
   
          0.609
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (11%) [HD]