STRINGSTRING
Psed_2935 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2935" - Citrate transporter in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2935Citrate transporter (469 aa)    
Predicted Functional Partners:
Psed_2936
Hypothetical protein (254 aa)
              0.861
Psed_2409
ArsR family transcriptional regulator (127 aa)
 
   
  0.643
Psed_0917
ArsR family transcriptional regulator (126 aa)
 
   
  0.624
Psed_4473
Regulatory protein ArsR (123 aa)
 
   
  0.599
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (526 aa)
              0.571
Psed_4354
Rhodanese-like protein (221 aa)
   
   
  0.560
Psed_5947
Oxidoreductase molybdopterin binding protein (396 aa)
 
        0.551
Psed_6307
Regulatory protein ArsR (138 aa)
   
   
  0.532
Psed_6163
Regulatory protein ArsR (112 aa)
   
   
  0.532
Psed_4947
Regulatory protein ArsR (116 aa)
   
   
  0.532
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (6%) [HD]