STRINGSTRING
Psed_2962 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2962" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2962Hypothetical protein (276 aa)    
Predicted Functional Partners:
Psed_3297
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit (626 aa)
   
  0.998
nuoC
NAD(P)H-quinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (291 aa)
   
  0.976
nuoB
NAD(P)H-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (183 aa)
   
  0.975
Psed_5564
NADH-quinone oxidoreductase subunit F (450 aa)
   
  0.974
Psed_3042
NADH dehydrogenase (quinone) (499 aa)
   
  0.974
Psed_0743
NADH dehydrogenase (quinone) (424 aa)
   
  0.974
Psed_5563
NADH-quinone oxidoreductase subunit G (820 aa)
   
    0.965
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (80 aa)
   
  0.963
Psed_5565
NADH dehydrogenase (quinone) (273 aa)
   
  0.963
Psed_3041
NADH dehydrogenase (ubiquinone) 24 kDa subunit (158 aa)
   
  0.963
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (12%) [HD]