STRINGSTRING
Psed_2971 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2971" - IclR family transcriptional regulator in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2971IclR family transcriptional regulator (263 aa)    
Predicted Functional Partners:
Psed_2970
Aldo/keto reductase (319 aa)
              0.863
Psed_4108
IclR family transcriptional regulator (253 aa)
   
          0.778
Psed_0077
IclR family transcriptional regulator (250 aa)
   
          0.775
Psed_0263
IclR family transcriptional regulator (247 aa)
   
          0.774
Psed_6530
IclR family transcriptional regulator (267 aa)
   
          0.771
Psed_1831
IclR family transcriptional regulator (233 aa)
   
          0.734
Psed_2972
Dihydroxyacetone kinase subunit DhaK (333 aa)
         
  0.640
Psed_2973
Dihydroxyacetone kinase subunit DhaL (209 aa)
         
  0.617
Psed_2974
Phosphoenolpyruvate-protein phosphotransferase (864 aa)
              0.606
Psed_2969
LuxR family transcriptional regulator (892 aa)
              0.599
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (7%) [HD]