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Psed_2980 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2980" - Helix-turn-helix domain-containing protein in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2980Helix-turn-helix domain-containing protein (152 aa)    
Predicted Functional Partners:
Psed_2769
Cyclase (144 aa)
   
          0.688
Psed_6498
Oxyanion-translocating ATPase (342 aa)
 
          0.678
Psed_2979
Poly-beta-hydroxybutyrate polymerase domain-containing protein (591 aa)
              0.666
Psed_0454
Hypothetical protein (99 aa)
   
          0.643
Psed_3345
S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine (399 aa)
         
  0.640
Psed_1070
Hypothetical protein (219 aa)
   
          0.606
Psed_1118
ABC transporter (456 aa)
 
          0.579
atpH
ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation (280 aa)
       
      0.554
Psed_6497
Oxyanion-translocating ATPase (393 aa)
 
          0.547
Psed_1189
Amidohydrolase (301 aa)
   
          0.525
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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