STRINGSTRING
Psed_2998 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2998" - Glucokinase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2998Glucokinase (390 aa)    
Predicted Functional Partners:
Psed_2997
ABC transporter permease (505 aa)
 
     
  0.959
Psed_3408
Glucose-6-phosphate isomerase (503 aa)
 
   
  0.954
Psed_2996
Monosaccharide-transporting ATPase (259 aa)
 
     
  0.953
pgi
Glucose-6-phosphate isomerase (554 aa)
       
  0.947
Psed_5288
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I (530 aa)
 
   
  0.935
Psed_3647
Phosphoglucomutase, alpha-D-glucose phosphate-specific (553 aa)
   
  0.921
Psed_5201
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II (451 aa)
       
  0.920
Psed_0544
4-alpha-glucanotransferase (647 aa)
     
    0.917
Psed_2707
Aldose-1-epimerase (299 aa)
       
  0.910
Psed_2995
Monosaccharide-transporting ATPase (376 aa)
 
     
  0.854
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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