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Psed_3037 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3037" - Metal ion ABC transporter periplasmic subunit in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3037Metal ion ABC transporter periplasmic subunit (297 aa)    
Predicted Functional Partners:
Psed_3039
ABC transporter permease (294 aa)
 
  0.999
Psed_3038
Sulfate-transporting ATPase (252 aa)
 
 
  0.998
Psed_6096
ABC transporter permease (292 aa)
   
  0.812
Psed_3040
DtxR family iron (metal) dependent repressor (220 aa)
         
  0.802
Psed_6094
Metal ion ABC transporter periplasmic subunit (308 aa)
   
     
  0.758
Psed_6095
Fe(3+)-transporting ATPase (282 aa)
 
   
  0.747
Psed_0654
ABC transporter (302 aa)
   
   
  0.620
Psed_4474
Fur family ferric uptake regulator (140 aa)
         
  0.614
Psed_2203
Cobalamin synthesis cobW domain-containing protein (450 aa)
 
     
  0.550
Psed_3648
Polyphosphate--glucose phosphotransferase (256 aa)
     
      0.504
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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