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Psed_3038 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3038" - Sulfate-transporting ATPase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3038Sulfate-transporting ATPase (252 aa)    
Predicted Functional Partners:
Psed_3039
ABC transporter permease (294 aa)
 
 
  0.998
Psed_3037
Metal ion ABC transporter periplasmic subunit (297 aa)
 
 
  0.998
Psed_6096
ABC transporter permease (292 aa)
 
   
  0.875
Psed_1540
Phosphonate-transporting ATPase (258 aa)
   
0.834
Psed_6193
Xenobiotic-transporting ATPase (630 aa)
 
 
 
0.820
Psed_5110
Xenobiotic-transporting ATPase (1286 aa)
   
 
 
0.820
Psed_4515
Xenobiotic-transporting ATPase (1596 aa)
   
 
 
0.820
Psed_3106
Xenobiotic-transporting ATPase (637 aa)
 
 
 
0.820
Psed_2630
Xenobiotic-transporting ATPase (600 aa)
 
 
    0.820
Psed_2554
Xenobiotic-transporting ATPase (616 aa)
   
 
 
0.820
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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