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Psed_3040 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3040" - DtxR family iron in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3040DtxR family iron (metal) dependent repressor (220 aa)    
Predicted Functional Partners:
Psed_3039
ABC transporter permease (294 aa)
       
  0.933
Psed_3038
Sulfate-transporting ATPase (252 aa)
         
  0.807
Psed_3037
Metal ion ABC transporter periplasmic subunit (297 aa)
         
  0.802
mntH
Manganese transport protein mntH; H(+)-stimulated, divalent metal cation uptake system (429 aa)
       
  0.674
Psed_0755
NADH ubiquinone oxidoreductase 20 kDa subunit (161 aa)
       
      0.657
Psed_2709
NRAMP family Mn2+/Fe2+ transporter (416 aa)
       
  0.650
Psed_3042
NADH dehydrogenase (quinone) (499 aa)
              0.537
Psed_3041
NADH dehydrogenase (ubiquinone) 24 kDa subunit (158 aa)
              0.537
Psed_3043
Formate dehydrogenase subunit alpha (942 aa)
              0.535
Psed_3044
Hypothetical protein (84 aa)
              0.535
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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