STRINGSTRING
Psed_3117 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3117" - Na+/H+ antiporter in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3117Na+/H+ antiporter (527 aa)    
Predicted Functional Partners:
Psed_5621
beta-Ig-H3/fasciclin (227 aa)
 
 
    0.659
Psed_3116
Hypothetical protein (174 aa)
              0.598
Psed_4265
ATPase (906 aa)
   
  0.537
Psed_0349
ATPase (792 aa)
   
  0.537
Psed_5110
Xenobiotic-transporting ATPase (1286 aa)
   
  0.532
Psed_0310
Xenobiotic-transporting ATPase (577 aa)
   
  0.529
Psed_0309
Xenobiotic-transporting ATPase (668 aa)
   
  0.518
Psed_1955
Glutamate synthase (1522 aa)
   
        0.513
Psed_3118
3-oxoacyl-ACP reductase (270 aa)
   
        0.466
Psed_6193
Xenobiotic-transporting ATPase (630 aa)
     
  0.446
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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