STRINGSTRING
Psed_3119 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3119" - TetR family transcriptional regulator in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3119TetR family transcriptional regulator (229 aa)    
Predicted Functional Partners:
Psed_3118
3-oxoacyl-ACP reductase (270 aa)
              0.745
Psed_5137
Glyoxalase/bleomycin resistance protein/dioxygenase (124 aa)
   
          0.566
Psed_1444
Antibiotic biosynthesis monooxygenase (98 aa)
   
          0.500
Psed_0808
Antibiotic biosynthesis monooxygenase (96 aa)
   
          0.477
Psed_3117
Na+/H+ antiporter (527 aa)
              0.400
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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