STRINGSTRING
Psed_3120 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3120" - Cysteine ABC transporter permease/ATP-binding protein CydC in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3120Cysteine ABC transporter permease/ATP-binding protein CydC (572 aa)    
Predicted Functional Partners:
Psed_3121
Cysteine ABC transporter permease/ATP-binding protein CydD (572 aa)
 
0.993
Psed_3122
Cytochrome d ubiquinol oxidase subunit II (333 aa)
 
     
  0.957
Psed_3123
Cytochrome bd ubiquinol oxidase subunit I (490 aa)
 
     
  0.957
Psed_6415
Cytochrome bd ubiquinol oxidase subunit I (477 aa)
 
     
  0.605
Psed_4092
ABC transporter permease (331 aa)
   
   
    0.550
Psed_4646
Peptide ABC transporter ATPase (316 aa)
 
 
 
0.550
Psed_3692
Peptide ABC transporter ATPase (380 aa)
 
 
 
0.549
Psed_6019
Peptide ABC transporter ATPase (330 aa)
 
 
 
0.549
Psed_4090
ABC transporter permease (337 aa)
   
   
    0.545
Psed_1749
Nickel-transporting ATPase (283 aa)
 
 
 
0.526
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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