STRINGSTRING
Psed_3159 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3159" - CDP-alcohol phosphatidyltransferase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3159CDP-alcohol phosphatidyltransferase (224 aa)    
Predicted Functional Partners:
Psed_4725
Phosphatidate cytidylyltransferase (287 aa)
   
 
  0.941
Psed_4622
CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase (205 aa)
   
   
0.930
Psed_3611
CDP-alcohol phosphatidyltransferase (209 aa)
       
  0.922
Psed_5712
CDP-alcohol phosphatidyltransferase (328 aa)
   
 
  0.918
Psed_4307
Phosphoesterase (613 aa)
         
    0.900
Psed_3973
Ribonuclease II (474 aa)
       
      0.742
Psed_3160
FHA domain-containing protein (148 aa)
 
        0.713
Psed_4413
ABC transporter substrate-binding protein (252 aa)
     
      0.662
Psed_3995
ABC transporter substrate-binding protein (324 aa)
     
      0.662
Psed_3104
Periplasmic binding protein (294 aa)
     
      0.662
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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