STRINGSTRING
Psed_3160 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3160" - FHA domain-containing protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3160FHA domain-containing protein (148 aa)    
Predicted Functional Partners:
Psed_5115
2-oxoglutarate dehydrogenase E1 (1263 aa)
       
 
  0.874
Psed_5298
Integral membrane protein MviN (673 aa)
   
 
      0.870
Psed_2779
Serine/threonine protein kinase with PASTA sensor(s) (585 aa)
 
 
  0.862
Psed_0114
Serine/threonine protein kinase with PASTA sensor(s) (643 aa)
 
 
  0.861
Psed_0118
Ser/Thr phosphatase (465 aa)
 
 
  0.829
Psed_5164
Serine/threonine protein kinase (476 aa)
 
 
  0.820
Psed_0115
Serine/threonine protein kinase (880 aa)
 
 
  0.817
Psed_4235
Serine/threonine protein kinase (448 aa)
 
 
  0.814
Psed_0117
Cell cycle protein (487 aa)
 
     
  0.809
Psed_4810
Ser/Thr phosphatase (274 aa)
 
 
  0.801
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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