STRINGSTRING
Psed_3164 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3164" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3164Hypothetical protein (293 aa)    
Predicted Functional Partners:
Psed_3165
Hypothetical protein (41 aa)
              0.859
Psed_3167
Hypothetical protein (444 aa)
              0.809
Psed_3166
Hypothetical protein (350 aa)
 
          0.799
Psed_2982
Methyltransferase small (497 aa)
   
          0.612
Psed_2988
Hypothetical protein (82 aa)
   
          0.586
mca
Mycothiol conjugate amidase Mca; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics (310 aa)
   
          0.564
Psed_4466
Hypothetical protein (460 aa)
 
          0.524
Psed_1897
DsbA oxidoreductase (208 aa)
   
          0.517
Psed_5379
Hypothetical protein (103 aa)
   
          0.472
Psed_3927
Hypothetical protein (192 aa)
   
          0.470
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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