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Psed_3170 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3170" - Regulatory protein MarR in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3170Regulatory protein MarR (163 aa)    
Predicted Functional Partners:
coaA
Pantothenate kinase (320 aa)
     
      0.581
Psed_0838
EmrB/QacA subfamily drug resistance transporter (508 aa)
 
     
  0.520
Psed_5903
Hypothetical protein (241 aa)
   
          0.491
Psed_4369
Cytochrome c oxidase caa3-type, assembly factor CtaG-like protein (324 aa)
   
          0.479
gyrA
DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner (839 aa)
     
 
  0.474
Psed_3340
EmrB/QacA subfamily drug resistance transporter (501 aa)
         
  0.451
Psed_2661
EmrB/QacA subfamily drug resistance transporter (532 aa)
         
  0.451
Psed_2616
EmrB/QacA subfamily drug resistance transporter (548 aa)
         
  0.451
Psed_0146
EmrB/QacA subfamily drug resistance transporter (962 aa)
         
  0.451
Psed_3929
Hypothetical protein (332 aa)
   
          0.443
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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