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Psed_3204 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3204" - ABC transporter substrate-binding protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3204ABC transporter substrate-binding protein (370 aa)    
Predicted Functional Partners:
Psed_3205
ABC transporter permease (571 aa)
 
   
    0.982
Psed_3206
Polyamine-transporting ATPase (380 aa)
 
   
    0.925
Psed_6641
ABC transporter permease (495 aa)
 
   
    0.871
Psed_6642
Fe(3+)-transporting ATPase (356 aa)
 
   
    0.839
Psed_6640
ABC transporter substrate-binding protein (348 aa)
   
   
    0.838
Psed_3207
alpha-methylacyl-CoA racemase (396 aa)
              0.467
Psed_6341
Glyoxalase/bleomycin resistance protein/dioxygenase (214 aa)
   
          0.460
Psed_3203
MerR family transcriptional regulator (297 aa)
              0.432
Psed_6343
Hypothetical protein (425 aa)
   
          0.431
Psed_6336
5-oxoprolinase (771 aa)
   
          0.414
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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