STRINGSTRING
Psed_3221 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3221" - Phenylacetone monooxygenase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3221Phenylacetone monooxygenase (604 aa)    
Predicted Functional Partners:
Psed_3222
Amidohydrolase (412 aa)
 
          0.878
Psed_3223
Alpha/beta hydrolase (341 aa)
       
  0.630
Psed_3220
Carboxylesterase type B (378 aa)
   
        0.575
Psed_1769
Xanthine permease (619 aa)
   
        0.553
Psed_3730
Carboxymuconolactone decarboxylase (186 aa)
 
          0.529
Psed_1574
Carboxymuconolactone decarboxylase (184 aa)
 
          0.495
Psed_3640
Hypothetical protein (109 aa)
         
  0.463
Psed_5106
Radical SAM domain-containing protein (408 aa)
         
  0.458
Psed_6232
AIR synthase-like protein domain-containing protein (332 aa)
         
  0.438
Psed_3219
Hypothetical protein (279 aa)
              0.432
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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