STRINGSTRING
Psed_3269 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3269" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3269Hypothetical protein (84 aa)    
Predicted Functional Partners:
Psed_0226
Hypothetical protein (204 aa)
   
          0.764
Psed_3268
AraC family transcriptional regulator (150 aa)
              0.655
Psed_3267
Glyoxalase/bleomycin resistance protein/dioxygenase (138 aa)
              0.655
Psed_3270
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex (161 aa)
              0.625
Psed_4084
Hypothetical protein (111 aa)
   
          0.567
Psed_2365
Catalase (293 aa)
   
          0.533
Psed_2333
Glycosyltransferase-like protein (283 aa)
   
          0.529
Psed_2334
Glycosyl transferase protein (358 aa)
   
          0.480
Psed_3152
ATP-binding protein (179 aa)
   
          0.476
Psed_0548
PAS/PAC sensor protein (1401 aa)
   
          0.470
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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