STRINGSTRING
Psed_3276 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3276" - Dolichyl-phosphate beta-D-mannosyltransferase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3276Dolichyl-phosphate beta-D-mannosyltransferase (252 aa)    
Predicted Functional Partners:
lnt
Apolipoprotein N-acyltransferase; Transfers the fatty acyl group on membrane lipoproteins (549 aa)
       
  0.978
Psed_3278
LmbE family protein (268 aa)
              0.716
Psed_3279
Amidohydrolase (503 aa)
              0.632
Psed_3285
DEAD/DEAH box helicase domain-containing protein (924 aa)
 
          0.562
Psed_0182
Family 2 glycosyl transferase (345 aa)
 
     
  0.465
thiL
Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 (328 aa)
   
          0.437
Psed_6607
FxsA cytoplasmic membrane protein (206 aa)
              0.412
Psed_4201
Allantoinase (488 aa)
              0.412
Psed_4164
Dihydropyrimidinase (481 aa)
              0.412
Psed_4154
Dihydropyrimidinase (468 aa)
              0.412
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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