STRINGSTRING
Psed_3282 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3282" - Peptidase M24 in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3282Peptidase M24 (376 aa)    
Predicted Functional Partners:
Psed_4920
Sarcosine oxidase (956 aa)
   
 
  0.739
Psed_3588
DNA polymerase I (939 aa)
   
   
  0.709
Psed_3283
5’-3’ exonuclease (312 aa)
   
   
  0.704
Psed_6656
Deoxyribonuclease IV (256 aa)
 
   
  0.649
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (887 aa)
 
   
  0.637
hisS
histidyl-tRNA synthetase (438 aa)
 
   
  0.605
Psed_2761
DNA polymerase III subunit epsilon (586 aa)
   
   
  0.599
Psed_0280
alanyl-tRNA synthetase (463 aa)
   
   
  0.591
Psed_3533
Elongation factor P (187 aa)
   
 
  0.588
Psed_5314
Bifunctional protein folD; Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate (288 aa)
   
 
  0.568
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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