STRINGSTRING
Psed_3295 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3295" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3295Hypothetical protein (374 aa)    
Predicted Functional Partners:
Psed_3297
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit (626 aa)
              0.636
Psed_3296
Molybdopterin oxidoreductase Fe4S4 region (316 aa)
              0.636
Psed_3298
Nitrate reductase (643 aa)
              0.616
Psed_0067
Hypothetical protein (168 aa)
   
          0.532
Psed_1931
AraC family transcriptional regulator (254 aa)
   
          0.519
Psed_3299
Molybdopterin-guanine dinucleotide biosynthesis protein A-like protein (298 aa)
              0.493
Psed_4268
Hypothetical protein (174 aa)
   
          0.482
Psed_0347
Hypothetical protein (240 aa)
   
          0.458
Psed_0919
Hypothetical protein (246 aa)
   
          0.439
Psed_3857
Hypothetical protein (150 aa)
   
          0.402
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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