STRINGSTRING
Psed_3312 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3312" - Regulatory protein MarR in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3312Regulatory protein MarR (137 aa)    
Predicted Functional Partners:
Psed_2304
MarR family transcriptional regulator (165 aa)
   
          0.778
Psed_3311
Short-chain dehydrogenase/reductase SDR (286 aa)
              0.614
Psed_0265
Surface layer protein (355 aa)
   
          0.454
Psed_6266
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein (393 aa)
   
          0.429
Psed_6099
Glyoxalase/bleomycin resistance protein/dioxygenase (146 aa)
   
          0.417
Psed_4480
Hypothetical protein (254 aa)
   
          0.403
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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