STRINGSTRING
Psed_3334 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3334" - Von Willebrand factor A in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3334Von Willebrand factor A (661 aa)    
Predicted Functional Partners:
Psed_3335
Mg-chelatase subunit ChlI-like protein (466 aa)
 
        0.980
Psed_1793
Amino acid-binding ACT domain-containing protein (219 aa)
   
          0.642
Psed_3336
Hypothetical protein (179 aa)
              0.606
Psed_5874
ErfK/YbiS/YcfS/YnhG family protein (407 aa)
   
          0.572
Psed_3894
ErfK/YbiS/YcfS/YnhG family protein (423 aa)
   
          0.549
Psed_0597
ErfK/YbiS/YcfS/YnhG family protein (395 aa)
   
          0.535
Psed_1507
Hypothetical protein (185 aa)
   
          0.515
Psed_0454
Hypothetical protein (99 aa)
   
          0.458
Psed_6681
Hypothetical protein (214 aa)
   
        0.448
Psed_2980
Helix-turn-helix domain-containing protein (152 aa)
   
          0.430
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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