STRINGSTRING
Psed_3337 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3337" - Peptidase M48 Ste24p in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3337Peptidase M48 Ste24p (301 aa)    
Predicted Functional Partners:
Psed_3338
CopY family transcriptional regulator (113 aa)
 
        0.961
Psed_4868
CopY family transcriptional regulator (176 aa)
   
          0.720
Psed_0425
Tjhreonine aldolase (387 aa)
       
      0.613
Psed_0231
Peptidyl-dipeptidase Dcp (677 aa)
     
 
  0.561
Psed_4576
TetR family transcriptional regulator (257 aa)
   
          0.556
Psed_5892
NADPH--hemoprotein reductase (1080 aa)
   
 
  0.555
prcA
Proteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation (267 aa)
   
   
  0.521
Psed_4834
Penicillinase repressor (135 aa)
   
          0.519
Psed_3339
ErfK/YbiS/YcfS/YnhG family protein (268 aa)
   
        0.513
Psed_5033
Family 2 glycosyl transferase (420 aa)
 
      0.482
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (6%) [HD]