STRINGSTRING
Psed_3339 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3339" - ErfK/YbiS/YcfS/YnhG family protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3339ErfK/YbiS/YcfS/YnhG family protein (268 aa)    
Predicted Functional Partners:
Psed_6514
Hypothetical protein (225 aa)
   
          0.616
Psed_1525
Hypothetical protein (73 aa)
 
          0.572
Psed_3338
CopY family transcriptional regulator (113 aa)
              0.570
Psed_1101
TrkA-N domain-containing protein (352 aa)
 
          0.559
Psed_5576
Hypothetical protein (170 aa)
   
          0.545
Psed_5372
Dienelactone hydrolase-like protein (276 aa)
   
          0.540
Psed_0169
Hypothetical protein (407 aa)
   
          0.536
Psed_0835
Transglycosylase-like domain-containing protein (717 aa)
   
          0.523
Psed_3337
Peptidase M48 Ste24p (301 aa)
   
        0.513
Psed_5295
Hypothetical protein (440 aa)
   
          0.511
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (11%) [HD]