STRINGSTRING
Psed_3340 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3340" - EmrB/QacA subfamily drug resistance transporter in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3340EmrB/QacA subfamily drug resistance transporter (501 aa)    
Predicted Functional Partners:
Psed_1803
Major facilitator superfamily protein (502 aa)
   
          0.773
Psed_3225
Major facilitator superfamily protein (495 aa)
   
          0.765
Psed_0339
Bcr/CflA subfamily drug resistance transporter (456 aa)
 
   
  0.586
Psed_3339
ErfK/YbiS/YcfS/YnhG family protein (268 aa)
   
        0.479
Psed_5641
Regulatory protein MarR (182 aa)
         
  0.451
Psed_5104
Regulatory protein MarR (155 aa)
         
  0.451
Psed_4979
MarR family transcriptional regulator (180 aa)
         
  0.451
Psed_4879
MarR family transcriptional regulator (159 aa)
         
  0.451
Psed_4410
Regulatory protein MarR (163 aa)
         
  0.451
Psed_4027
Regulatory protein MarR (154 aa)
         
  0.451
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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