STRINGSTRING
Psed_3343 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3343" - DNA-directed DNA polymerase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3343DNA-directed DNA polymerase (502 aa)    
Predicted Functional Partners:
dcd
Deoxycytidine triphosphate deaminase (193 aa)
         
    0.900
Psed_4457
Deoxyguanosinetriphosphate triphosphohydrolase-like protein (432 aa)
         
    0.900
Psed_2869
Pyruvate kinase (472 aa)
         
    0.900
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (136 aa)
         
    0.900
Psed_3588
DNA polymerase I (939 aa)
   
   
0.811
Psed_2761
DNA polymerase III subunit epsilon (586 aa)
       
    0.801
Psed_2831
DNA polymerase III subunit alpha (1185 aa)
         
  0.800
Psed_6489
DNA polymerase III subunit delta’ (383 aa)
         
    0.800
Psed_2012
DNA polymerase III subunit delta (342 aa)
         
    0.800
Psed_0348
DNA polymerase III subunits gamma and tau (829 aa)
         
    0.800
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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