STRINGSTRING
Psed_3364 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3364" - Luciferase-like protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3364Luciferase-like protein (345 aa)    
Predicted Functional Partners:
Psed_3362
Alpha/beta hydrolase (266 aa)
 
          0.862
Psed_3359
Transcriptional regulator CdaR (612 aa)
 
          0.823
Psed_3363
o-succinylbenzoate--CoA ligase (542 aa)
 
   
  0.801
Psed_3361
3-oxoacyl-ACP reductase (238 aa)
 
        0.792
Psed_5207
F420-0-gamma-glutamyl ligase (454 aa)
 
   
  0.746
Psed_3360
Luciferase-like protein (363 aa)
 
       
0.708
Psed_5839
NADPH-dependent FMN reductase (189 aa)
   
 
  0.667
Psed_6467
5,10-methylenetetrahydromethanopterin reductase (330 aa)
   
          0.660
Psed_3366
(R)-benzylsuccinyl-CoA dehydrogenase (429 aa)
 
        0.617
Psed_6234
Luciferase-like protein (356 aa)
   
          0.574
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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