STRINGSTRING
Psed_3391 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3391" - UspA domain-containing protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3391UspA domain-containing protein (149 aa)    
Predicted Functional Partners:
Psed_3392
Guanylate cyclase (315 aa)
 
        0.885
Psed_5716
Molecular chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (542 aa)
   
 
  0.582
Psed_5359
Molecular chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (540 aa)
   
 
  0.582
Psed_0633
Molecular chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (561 aa)
   
 
  0.582
Psed_0205
GtrA family protein (146 aa)
   
          0.546
Psed_0189
Cell wall arabinan synthesis protein (995 aa)
   
          0.514
Psed_4265
ATPase (906 aa)
   
   
  0.485
Psed_0349
ATPase (792 aa)
   
   
  0.485
Psed_0206
Family 2 glycosyl transferase (304 aa)
   
          0.479
Psed_6236
Phosphoglycerate kinase (392 aa)
   
   
  0.457
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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