STRINGSTRING
Psed_3410 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3410" - OpcA protein in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3410OpcA protein (317 aa)    
Predicted Functional Partners:
Psed_3411
6-phosphogluconolactonase (260 aa)
   
  0.961
Psed_3409
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone (522 aa)
 
   
  0.936
Psed_3407
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway (370 aa)
 
     
  0.787
Psed_4621
Helix-turn-helix domain-containing protein (123 aa)
   
          0.743
Psed_3408
Glucose-6-phosphate isomerase (503 aa)
              0.718
Psed_3406
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate (695 aa)
   
   
  0.699
Psed_1121
Hypothetical protein (514 aa)
   
          0.696
Psed_3929
Hypothetical protein (332 aa)
   
          0.641
Psed_2813
Hypothetical protein (95 aa)
   
          0.630
Psed_3275
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters (113 aa)
   
          0.616
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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