STRINGSTRING
Psed_3426 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3426" - Hypothetical protein in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3426Hypothetical protein (305 aa)    
Predicted Functional Partners:
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin (160 aa)
   
        0.884
Psed_3428
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (437 aa)
   
        0.764
Psed_5203
Hypothetical protein (159 aa)
   
        0.753
Psed_3430
Riboflavin biosynthesis protein RibD (385 aa)
              0.751
Psed_5372
Dienelactone hydrolase-like protein (276 aa)
   
          0.721
Psed_5336
Chorismate mutase (94 aa)
   
          0.716
Psed_1086
Hypothetical protein (250 aa)
   
        0.703
Psed_2787
Hypothetical protein (204 aa)
   
          0.702
Psed_5378
Hypothetical protein (95 aa)
   
          0.673
Psed_2755
Rieske (2Fe-2S) domain-containing protein (378 aa)
   
        0.672
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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