STRINGSTRING
Psed_3436 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3436" - Geranylgeranyl reductase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3436Geranylgeranyl reductase (425 aa)    
Predicted Functional Partners:
Psed_1772
Electron transfer flavoprotein subunit alpha (315 aa)
 
 
  0.950
Psed_1771
Electron transfer flavoprotein subunit alpha/beta (262 aa)
 
 
  0.934
Psed_5555
Trans-hexaprenyltranstransferase (331 aa)
 
 
  0.714
priA
Primosomal protein N’; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA (686 aa)
 
          0.693
Psed_0649
3-hydroxybutyryl-CoA epimerase (720 aa)
   
   
  0.688
Psed_5593
D-lactate dehydrogenase (982 aa)
 
     
  0.645
Psed_3297
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit (626 aa)
   
   
  0.636
Psed_6643
Hypothetical protein (207 aa)
   
          0.634
Psed_6028
D-lactate dehydrogenase (1050 aa)
 
     
  0.631
Psed_3679
Dimethylallyltranstransferase (356 aa)
   
 
  0.607
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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