STRINGSTRING
Psed_3437 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3437" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3437Hypothetical protein (65 aa)    
Predicted Functional Partners:
Psed_3989
Hypothetical protein (246 aa)
   
          0.624
Psed_4661
Hypothetical protein (157 aa)
   
          0.619
Psed_2423
Polyketide cyclase/dehydrase (149 aa)
   
          0.607
Psed_3439
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (400 aa)
              0.536
Psed_3438
Cupin (154 aa)
              0.536
Psed_4576
TetR family transcriptional regulator (257 aa)
   
          0.532
Psed_1653
Hypothetical protein (434 aa)
   
          0.532
Psed_1789
Hypothetical protein (239 aa)
   
          0.509
Psed_1737
Signal transduction histidine kinase (379 aa)
   
          0.498
Psed_1573
Biotin carboxylase (1873 aa)
   
          0.478
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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