STRINGSTRING
Psed_3511 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3511" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3511Hypothetical protein (90 aa)    
Predicted Functional Partners:
Psed_4362
Vitamin K epoxide reductase (207 aa)
   
          0.601
Psed_5138
Antibiotic biosynthesis monooxygenase (114 aa)
   
          0.559
Psed_3510
Transcription elongation factor GreA (151 aa)
              0.536
Psed_0256
MOSC domain-containing protein (273 aa)
   
          0.529
Psed_5012
Antibiotic biosynthesis monooxygenase (106 aa)
   
          0.513
Psed_5579
MOSC domain-containing protein beta barrel domain-containing protein (282 aa)
   
          0.500
Psed_3512
Hypothetical protein (248 aa)
              0.471
Psed_3155
ATP-binding protein (316 aa)
   
          0.462
Psed_5251
Hypothetical protein (217 aa)
   
          0.460
Psed_5822
G-D-S-L family lipolytic protein (266 aa)
   
          0.455
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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