STRINGSTRING
Psed_3521 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3521" - Hypothetical protein in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3521Hypothetical protein (104 aa)    
Predicted Functional Partners:
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP (220 aa)
              0.719
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (92 aa)
              0.719
Psed_3518
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (408 aa)
              0.719
Psed_3160
FHA domain-containing protein (148 aa)
   
          0.667
Psed_3872
RNA binding S1 domain-containing protein (487 aa)
   
          0.659
pyrC
Dihydroorotase, multifunctional complex type (433 aa)
 
          0.636
Psed_3143
DEAD/DEAH box helicase domain-containing protein (840 aa)
 
          0.611
Psed_6552
MerR family transcriptional regulator (155 aa)
   
          0.594
Psed_1923
tryptophanyl-tRNA synthetase (346 aa)
   
          0.578
carA
Carbamoyl-phosphate synthase small subunit (603 aa)
              0.573
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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