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pyrB protein (Pseudonocardia dioxanivorans) - STRING interaction network
"pyrB" - Aspartate carbamoyltransferase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pyrBAspartate carbamoyltransferase (314 aa)    
Predicted Functional Partners:
pyrC
Dihydroorotase, multifunctional complex type (433 aa)
  0.999
carA
Carbamoyl-phosphate synthase small subunit (603 aa)
  0.999
carB
Carbamoyl-phosphate synthase large subunit (1099 aa)
  0.999
Psed_1758
Allantoinase (441 aa)
 
  0.996
pyrR
Bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant (195 aa)
 
 
  0.994
Psed_3523
Orotidine 5’-phosphate decarboxylase (303 aa)
   
 
  0.983
Psed_3025
Dihydropyrimidinase (486 aa)
 
  0.980
Psed_3030
Allantoinase (478 aa)
 
 
  0.979
Psed_4164
Dihydropyrimidinase (481 aa)
 
  0.977
Psed_4201
Allantoinase (488 aa)
 
 
  0.976
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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