STRINGSTRING
Psed_3534 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3534" - Peptidase M24 in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3534Peptidase M24 (362 aa)    
Predicted Functional Partners:
aroB
3-dehydroquinate synthase (367 aa)
              0.911
Psed_3533
Elongation factor P (187 aa)
   
 
  0.783
hisS
histidyl-tRNA synthetase (438 aa)
 
   
  0.781
aroQ
3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate (146 aa)
 
        0.758
nusB
NusB antitermination factor; Involved in the transcription termination process (139 aa)
 
   
  0.742
Psed_4920
Sarcosine oxidase (956 aa)
   
 
  0.739
Psed_3588
DNA polymerase I (939 aa)
   
   
  0.709
Psed_6656
Deoxyribonuclease IV (256 aa)
 
   
  0.679
Psed_5653
seryl-tRNA synthetase (420 aa)
 
   
  0.677
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system (395 aa)
   
        0.667
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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