STRINGSTRING
Psed_3540 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3540" - Hypothetical protein in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Psed_3540Hypothetical protein (278 aa)    
Predicted Functional Partners:
Psed_3345
S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine (399 aa)
   
   
  0.797
Psed_3541
Aminodeoxychorismate lyase (750 aa)
              0.710
Psed_3320
tRNA (adenine-N(1)-)-methyltransferase (310 aa)
   
        0.658
rplD
50S ribosomal protein L4; Forms part of the polypeptide exit tunnel (308 aa)
     
        0.613
Psed_6226
Hypothetical protein (303 aa)
   
          0.608
Psed_2893
Hypothetical protein (197 aa)
   
          0.607
Psed_3346
Ornithine decarboxylase (374 aa)
   
 
  0.588
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (499 aa)
   
 
  0.588
Psed_0658
Hypothetical protein (186 aa)
 
        0.587
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (291 aa)
 
        0.558
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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