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Psed_3542 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3542" - Holliday junction resolvase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3542Holliday junction resolvase; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (149 aa)    
Predicted Functional Partners:
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (887 aa)
 
        0.900
Psed_3541
Aminodeoxychorismate lyase (750 aa)
   
   
  0.805
Psed_3545
Hypothetical protein (125 aa)
              0.736
Psed_3544
Hypothetical protein (101 aa)
              0.680
Psed_6396
Amidase (257 aa)
 
          0.632
Psed_6670
Hypothetical protein (201 aa)
   
   
  0.572
Psed_0525
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (761 aa)
              0.564
Psed_3641
Shikimate dehydrogenase substrate binding domain-containing protein (300 aa)
   
 
  0.562
Psed_6051
Amidase (472 aa)
 
          0.562
Psed_1671
Sua5/YciO/YrdC/YwlC family protein (214 aa)
 
   
  0.546
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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