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Psed_3561 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3561" - Aromatic-ring-hydroxylating dioxygenase subunit beta in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3561Aromatic-ring-hydroxylating dioxygenase subunit beta (189 aa)    
Predicted Functional Partners:
Psed_3560
Carboxymuconolactone decarboxylase (163 aa)
 
          0.729
Psed_2564
Hypothetical protein (181 aa)
   
          0.695
Psed_4946
Glyoxalase/bleomycin resistance protein/dioxygenase (156 aa)
   
          0.513
Psed_1799
SMP-30/Gluconolaconase/LRE-like region-containing protein (283 aa)
 
          0.506
Psed_2592
Hypothetical protein (62 aa)
   
          0.447
Psed_5927
Aminoglycoside phosphotransferase (328 aa)
   
          0.440
Psed_5633
Aromatic compounds degradation protein PaaI (284 aa)
   
          0.438
Psed_3562
Peptidase S1 and S6 chymotrypsin/Hap (300 aa)
              0.434
Psed_2579
Hypothetical protein (137 aa)
   
          0.434
Psed_2555
Carboxymuconolactone decarboxylase (206 aa)
   
          0.433
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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