STRINGSTRING
Psed_3566 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3566" - Aspartate transaminase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3566Aspartate transaminase (384 aa)    
Predicted Functional Partners:
Psed_3565
AsnC family transcriptional regulator (163 aa)
 
     
  0.979
Psed_3000
Aspartate kinase (416 aa)
   
  0.932
Psed_0362
Aspartate kinase (421 aa)
   
  0.932
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (328 aa)
   
 
  0.919
Psed_6328
Malate dehydrogenase (387 aa)
       
  0.902
Psed_2846
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate (567 aa)
       
  0.902
Psed_1955
Glutamate synthase (1522 aa)
   
 
  0.864
Psed_3564
GntR family transcriptional regulator (417 aa)
 
 
0.861
Psed_1664
Homoserine dehydrogenase (456 aa)
   
 
  0.763
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (291 aa)
 
     
  0.664
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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