STRINGSTRING
Psed_3591 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3591" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3591Hypothetical protein (392 aa)    
Predicted Functional Partners:
Psed_3590
Tellurium resistance (233 aa)
 
          0.940
Psed_3589
Stress protein (191 aa)
 
          0.939
Psed_3595
Hypothetical protein (571 aa)
 
     
  0.867
Psed_3593
Hypothetical protein (284 aa)
 
          0.864
Psed_3594
Tellurite resistance TerB (151 aa)
 
          0.817
Psed_6199
Molecular chaperone DnaJ (405 aa)
 
          0.706
Psed_3035
3-oxoacid CoA-transferase subunit A (482 aa)
   
   
  0.554
Psed_4409
methylmalonyl-CoA mutase large subunit (1081 aa)
         
  0.537
Psed_6172
Acyl dehydratase MaoC (276 aa)
         
  0.492
Psed_6149
enoyl-CoA hydratase (170 aa)
         
  0.492
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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