STRINGSTRING
Psed_3601 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3601" - Malic protein NAD-binding protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_3601Malic protein NAD-binding protein (466 aa)    
Predicted Functional Partners:
Psed_3979
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha (551 aa)
 
 
  0.971
Psed_2085
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (430 aa)
   
  0.971
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (328 aa)
   
  0.964
fumC
Class II fumarate hydratase (466 aa)
   
  0.954
Psed_2869
Pyruvate kinase (472 aa)
   
  0.949
Psed_4769
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second (1125 aa)
   
  0.945
Psed_5549
2-oxoacid-acceptor oxidoreductase subunit alpha (647 aa)
       
  0.936
Psed_6027
Pyruvate dehydrogenase (604 aa)
   
 
  0.929
Psed_3473
Pyruvate dehydrogenase (588 aa)
   
 
  0.929
Psed_2427
Acetolactate synthase (601 aa)
   
 
  0.929
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (9%) [HD]