STRINGSTRING
Psed_3610 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_3610" - Lipid A biosynthesis acyltransferase in Pseudonocardia dioxanivorans
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
Psed_3610Lipid A biosynthesis acyltransferase (306 aa)    
Predicted Functional Partners:
Psed_3609
Phosphatidylinositol alpha-mannosyltransferase (396 aa)
 
   
  0.983
Psed_3608
NUDIX hydrolase (186 aa)
 
          0.967
Psed_3611
CDP-alcohol phosphatidyltransferase (209 aa)
 
   
  0.938
Psed_2765
Group 1 glycosyl transferase (387 aa)
 
   
  0.833
Psed_3612
Histidine triad (HIT) protein (190 aa)
   
        0.803
pdxS
Pyridoxal biosynthesis lyase pdxS; Catalyzes the formation of pyridoxal 5’-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively (309 aa)
              0.774
thrS
threonyl-tRNA synthetase (682 aa)
   
        0.751
Psed_3321
RecB family exonuclease (371 aa)
   
        0.688
Psed_1530
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (97 aa)
   
          0.664
Psed_5358
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (104 aa)
   
          0.646
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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